Information for 2-CAMCAGCCAGCCC (Motif 5)

T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
Reverse Opposite:
C T A G A C T G A T C G A G T C C A G T A C T G A C T G A G T C A C G T A C T G C A T G A G C T A C T G
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.809
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets41.9 +/- 22.1bp
Average Position of motif in Background41.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAMCAGCCAGCCC
---ATGCCAGACN
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAMCAGCCAGCCC
AGCAACAGCCGCACC
 A C G T A C G T T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CAMCAGCCAGCCC-
------CTAGGCCT
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAMCAGCCAGCCC-
------CNAGGCCT
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAMCAGCCAGCCC
TGACANARRCCAGRC-
 A C G T A C G T A C G T T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAMCAGCCAGCCC----
--SCAGYCADGCATGAC
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAMCAGCCAGCCC
GGACCACCCACG--
 A C G T T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAMCAGCCAGCCC
----AGCGCGCC-
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAMCAGCCAGCCC------
CCCCAAACCACCCCCCCCCA
 A C G T T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAMCAGCCAGCCC----
-TCGACCCCGCCCCTAT
 T G A C C T G A G T A C G T A C C G T A T C A G A G T C A G T C G T C A A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T