Information for 7-GAAGCTCACG (Motif 17)

A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G
Reverse Opposite:
T G A C A C T G A C G T A C T G T C G A A C T G A G T C A G C T A C G T A G T C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.850
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets65.3 +/- 19.2bp
Average Position of motif in Background51.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAAGCTCACG
-AAGGTCAC-
 A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCTCACG
NGAAGC-----
 A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCTCACG
TCAAGGTCAN-
 A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAGCTCACG
TCAAGGTCAT-
 A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAAGCTCACG--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAGCTCACG--
-ACGCCCACGCA
 A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAAGCTCACG--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCTCACG----
NNTTTGCACACGGCCC
 A C G T A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAGCTCACG-----
AGCGGCACACACGCAA
 A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAAGCTCACG---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C T G G T A C A C G T A G T C C G T A G T A C A C T G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A