Information for 7-CCCGTCTGGAAAA (Motif 16)

A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
Reverse Opposite:
A G C T C G A T A C G T A G C T A G T C A G T C C G T A A C T G T G C A G T A C A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 27.6bp
Average Position of motif in Background33.0 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CCCGTCTGGAAAA
------TGGAAAA
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCGTCTGGAAAA
-CTGTCTGG----
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCCGTCTGGAAAA
VBSYGTCTGG----
 A C G T A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCGTCTGGAAAA-
----NATGGAAAAN
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCCGTCTGGAAAA
--GGTCTGGCAT-
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTGGAAAA-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCCGTCTGGAAAA-
----AATGGAAAAT
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCCGTCTGGAAAA-
----AATGGAAAAT
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCCGTCTGGAAAA-
----NNTGGAAANN
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCGTCTGGAAAA
--CTTCTGGGAAA
 A G T C A G T C G T A C A C T G A C G T A G T C A C G T A C T G C T A G C T G A C G T A C G T A C T G A
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A