Information for 16-YSTCTRTYGCSTC (Motif 35)

A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A T A G C C T A G A G T C C T G A G T C A A G T C G T C A T A C G G T C A A T C G C T A G
p-value:1e-5
log p-value:-1.297e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif27.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.1 +/- 15.7bp
Average Position of motif in Background47.1 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ATF4/MA0833.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:YSTCTRTYGCSTC----
----TATTGCATCATCC
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

ZBED1/MA0749.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YSTCTRTYGCSTC---
---CTATCGCGACATA
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YSTCTRTYGCSTC
CTGTCTGTCACCT-
 A C G T A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YSTCTRTYGCSTC--
-----ATTGCATCAK
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YSTCTRTYGCSTC
TGTCTGDCACCT-
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:YSTCTRTYGCSTC--
-----ATTGCATCAT
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YSTCTRTYGCSTC-
------TGACGTCA
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---YSTCTRTYGCSTC
VBSYGTCTGG------
 A C G T A C G T A C G T A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-YSTCTRTYGCSTC
CCACCTGTTGCAT-
 A C G T A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:YSTCTRTYGCSTC---
------TTGCAACATN
 A G T C A T G C A C G T A G T C A C G T C T A G A C G T A G C T A C T G A G T C A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C