p-value: | 1e-5 |
log p-value: | -1.341e+01 |
Information Content per bp: | 1.963 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.91% |
Number of Background Sequences with motif | 26.0 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 57.7 +/- 26.8bp |
Average Position of motif in Background | 43.2 +/- 29.8bp |
Strand Bias (log2 ratio + to - strand density) | -2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCAGACTGG -CCAGACAG- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCAGACTGG- -CCAGACRSVB |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACCAGACTGG--- CAAATCCAGACATCACA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCAGACTGG -BCAGACWA- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACCAGACTGG ATGCCAGACN-- |
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GLI2/MA0734.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCAGACTGG GCGACCACACTG- |
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NFYB/MA0502.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACCAGACTGG------- --CTGATTGGTCNATTT |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACCAGACTGG--- ---WDNCTGGGCA |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACCAGACTGG-- --CCGATTGGCT |
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NFYA/MA0060.2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACCAGACTGG---- AGAGTGCTGATTGGTCCA |
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