Information for 14-AGACATGCTGGCACTC (Motif 21)

C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C G T A G T C A C G T
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 18.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGACATGCTGGCACTC
---CATGCGGGTAC--
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGACATGCTGGCACTC--
------NCTGTCAATCAN
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGACATGCTGGCACTC
-----GGTTGGCAT--
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGACATGCTGGCACTC--
------SCTGTCAVTCAV
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGACATGCTGGCACTC-
-----GSCTGTCACTCA
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGACATGCTGGCACTC
---TATGCGGGTA---
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGACATGCTGGCACTC-
-NGTAGGTTGGCATNNN
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGACATGCTGGCACTC
NNNNATGCGGGTNNNN
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGACATGCTGGCACTC
------NTTGGCANN-
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGACATGCTGGCACTC
------GCTCGGSCTC
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C