Information for 11-ACAGMCCGGCTGCTCA (Motif 15)

G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
Reverse Opposite:
A C G T A T C G C G T A A C T G G T A C G C T A A T C G G T A C T G A C C T A G A T C G A C G T A G T C C G A T A C T G C G A T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.719
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.2 +/- 22.0bp
Average Position of motif in Background41.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACAGMCCGGCTGCTCA
CACAGN-----------
 A C G T G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACAGMCCGGCTGCTCA
AGCAACAGCCGCACC-----
 A C G T A C G T A C G T A C G T G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
-NTGCCCTTGGGCGN-
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
--TGCCCTNGGGCA--
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:ACAGMCCGGCTGCTCA--
--GGGCCGTGTGCAAAAA
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A A C G T A C G T
A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
--TGCCCNGGGGCA--
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
--TGCCCTNGGGCA--
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
CCAGACRSVB------
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
-NTGCCCANNGGTNA-
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:ACAGMCCGGCTGCTCA
CCAGACAG--------
 G C T A A G T C C G T A A C T G T G C A A T G C A G T C A C T G A C T G A T G C C G A T A C T G A G T C C G A T A T G C G T C A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T