Information for 2-RCMSTGTCYTRTYMTC (Motif 3)

T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C T A G C G T A A G C T C G T A C T G A A C T G C G T A A G T C C G T A A T C G A C G T A C T G A G C T
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.828
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.5 +/- 6.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC
-TNTTATCTTATCTT-
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RCMSTGTCYTRTYMTC
CCATTGTTTT------
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC
---NTGTCAN------
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC
--CCTGTCAA------
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:RCMSTGTCYTRTYMTC
-CTTTGT---------
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:RCMSTGTCYTRTYMTC
----TGTCANYT----
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC--
----TGACCTTTGCCCTA
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC-
--CTTATCTCHMCATCT
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C A C G T
A C G T A C G T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-RCMSTGTCYTRTYMTC
CTCATTGTC--------
 A C G T T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:RCMSTGTCYTRTYMTC
----TGACCTYA----
 T C A G A G T C G T C A A T G C A C G T A C T G A C G T A G T C A G C T C G A T C T G A A C G T A G T C G T A C A C G T A G T C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T