Information for 11-GCTGGTAACTCTA (Motif 18)

A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A C T G A C G T A C G T C G T A A G T C A G T C C G T A A C T G A G T C
p-value:1e-4
log p-value:-9.482e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTAACTCTA-
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTAACTCTA--
NNNCTGATATCTCNNNN
 A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCTGGTAACTCTA---
----GWAAYHTGAKMC
 A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTGGTAACTCTA
-CAGGTAAGTAT-
 A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCTGGTAACTCTA
SCCTAGCAACAG--
 A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGTAACTCTA---
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGGTAACTCTA
CNTGTTTACATA-
 A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCTGGTAACTCTA---
AGCTGTTAACTAGCCGT
 A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTAACTCTA
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTAACTCTA-
GYCTGGYYTNTGTCA
 A C G T A C T G A G T C A C G T A C T G A C T G A C G T C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A