Information for 2-AATCCTCACG (Motif 10)

C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
p-value:1e-4
log p-value:-9.482e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATCCTCACG
TCCAATCCACA--
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATCCTCACG
SSAATCCACANN
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AATCCTCACG
NYTAATCCYB---
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCTCACG
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATCCTCACG
TTAATCCT----
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATCCTCACG
CTAATCCTCTT-
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATCCTCACG-
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATCCTCACG
CCTAATCCGC---
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCTCACG
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATCCTCACG
YTAATCCY----
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A G T C A C T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T