Information for 8-AGTTGTCTGA (Motif 9)

C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A A C T G C G T A G T A C C T G A C G T A A G T C C G A T
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.846
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif105.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets68.9 +/- 19.9bp
Average Position of motif in Background51.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGTTGTCTGA
--TWGTCTGV
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTTGTCTGA
--CTGTCTGG
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTCTGA-----
NNTNNTGTCTGGNNTNG
A C G T A C G T C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTTGTCTGA
VBSYGTCTGG
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTTGTCTGA---
-GTGGCGTGACNG
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AGTTGTCTGA
GAAGAACAGGTGTCCG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTCTGA
NNACTTGCCTT-
A C G T A C G T C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTTGTCTGA-
-ATGGGGTGAT
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTTGTCTGA
---TGACTCA
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A
A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGTTGTCTGA-----
---TGTCTGDCACCT
C G T A A C T G G C A T A G C T A C T G G C A T G T A C A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T