p-value: | 1e-10 |
log p-value: | -2.368e+01 |
Information Content per bp: | 1.846 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 1.86% |
Number of Background Sequences with motif | 105.2 |
Percentage of Background Sequences with motif | 0.22% |
Average Position of motif in Targets | 68.9 +/- 19.9bp |
Average Position of motif in Background | 51.5 +/- 29.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTTGTCTGA --TWGTCTGV |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTTGTCTGA --CTGTCTGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTTGTCTGA----- NNTNNTGTCTGGNNTNG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGTTGTCTGA VBSYGTCTGG |
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Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTTGTCTGA--- -GTGGCGTGACNG |
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PB0047.1_Myf6_1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------AGTTGTCTGA GAAGAACAGGTGTCCG- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTTGTCTGA NNACTTGCCTT- |
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Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTTGTCTGA- -ATGGGGTGAT |
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FOS::JUN/MA0099.2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGTTGTCTGA ---TGACTCA |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGTTGTCTGA----- ---TGTCTGDCACCT |
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