Information for 8-CCGAGACGGTAGA (Motif 15)

A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T G T C A A T G C G T A C C T A G A G C T A G T C A G C T A T G C C T A G A C T G
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 30.8bp
Average Position of motif in Background58.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGAGACGGTAGA
-CCAGACAG----
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGAGACGGTAGA
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCGAGACGGTAGA-
---GGGCGGGAAGG
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGACGGTAGA
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGACGGTAGA
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGAGACGGTAGA----
-ATTTACAGTAGCAAAA
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCGAGACGGTAGA-
---GGGCGGGAAGG
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCGAGACGGTAGA----
-ATGTACAGTAGCAAAG
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCGAGACGGTAGA
-CCAGACRSVB--
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CCGAGACGGTAGA--
---TGGCGGGAAAHB
 A G T C A G T C A T C G C T G A C T A G C T G A A G T C A C T G A T C G A C G T C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G