Information for 7-GGGCAWCCGAGGG (Motif 14)

A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
Reverse Opposite:
G A T C A G T C A G T C A C G T A G T C C T A G A C T G C G A T A C G T A C T G A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.814
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 18.8bp
Average Position of motif in Background48.8 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGCAWCCGAGGG--
GGTCANYTGAGGWCA
 A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G A C G T A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAWCCGAGGG
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAWCCGAGGG
NGTGGGCAT-------
 A C G T A C G T A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAWCCGAGGG
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGCAWCCGAGGG
GGGGCCCAAGGGGG
 A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGCAWCCGAGGG----
--GGCACCCAGGGGTGC
 A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

RARA(var.2)/MA0730.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCAWCCGAGGG---
AGGTCATGCAAAGGTCA
 A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G A C G T A C G T A C G T
T C G A A C T G A C T G A C G T G A T C T G C A G A C T A T C G A G T C C G T A T C G A T C G A C A T G A C T G A C G T A T G C C T G A

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGCAWCCGAGGG
TGGGGA--------
 A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGGCAWCCGAGGG
WDNCTGGGCA--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGCAWCCGAGGG----
RGGTCADNNAGAGGTCAV
 A C G T A C T G A C T G A C T G T A G C C G T A C G T A T G A C A G T C C T A G G T C A A C T G A C T G C A T G A C G T A C G T A C G T A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C