Information for 3-ATCTATTTTDTAG (Motif 8)

G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
Reverse Opposite:
T A G C G A C T G T C A G T A C G C T A C G T A C G T A C G T A A G C T G C T A C A T G C G T A C G A T
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.686
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif245.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets53.7 +/- 19.3bp
Average Position of motif in Background49.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT2/MA0756.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATCTATTTTDTAG
ATTATCGATTTTTT--
 A C G T A C G T A C G T G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATCTATTTTDTAG
ANTATCGATTTTTN--
 A C G T A C G T A C G T G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCTATTTTDTAG--
TTCTATTTTTAGNNN
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCTATTTTDTAG
NTTATTGATTTTTT--
 A C G T A C G T A C G T G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCTATTTTDTAG----
NTNAATTTTATTGNATT
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCTATTTTDTAG
-KCTATTTTTRGH
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCTATTTTDTAG----
-NNANTTTTATTGGNNN
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCTATTTTDTAG
--CTATTTTTGG-
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTATTTTDTAG--
-NNTTTTTCTTATNT
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCTATTTTDTAG----
ANTAATTTTATGGCCGN
 G C T A A C G T G T A C C G A T T C G A C G A T C G A T A C G T C A G T C A T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T