Information for 4-CTTTGTTTCCAYTTTC (Motif 3)

A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G G T C A G T C A C G T A T C A G C G A T A C T G C T A G C T G A C G T A C T G A G T A C C G T A C G T A C G T A T C A G
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.755
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets38.0 +/- 29.1bp
Average Position of motif in Background50.6 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTTTGTTTCCAYTTTC
CTTTGTTTACTTTTN-
 A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTTCCAYTTTC
NNNTTTGTTTACATTTN-
 A C G T A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTTCCAYTTTC
NNNTTTGTTTACATTTN-
 A C G T A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTTCCAYTTTC
NNNTTTGTTTACATTTN-
 A C G T A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTTCCAYTTTC
CCTTTGTTTT-------
 A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTTGTTTCCAYTTTC-----
TTTTACTTTCACTTTCACTTT
 A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTTGTTTCCAYTTTC
TTTTTTTTCNNGTN--
 A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGTTTCCAYTTTC-
GTTTTGCTTTCACTTTCC
 A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTTCCAYTTTC
TNNTCCTTTGTTCTNNT----
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTTCCAYTTTC
NNNTTTGTTTACTTTTN-
 A C G T A C G T A G T C G A C T A C G T A C G T A C T G A G C T A C G T A G C T A G T C G T A C C G T A A G T C A C G T A C G T A C G T A G T C
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T