Information for 4-TTCATTAAGC (Motif 11)

A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C
Reverse Opposite:
T A C G A G T C A C G T C A G T G T C A C T G A C G A T C A T G C G T A C G T A
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.844
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif258.6
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets55.8 +/- 20.6bp
Average Position of motif in Background51.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTCATTAAGC
GTAATTAA--
 A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTCATTAAGC--
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0153.1_Prop1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TTCATTAAGC---
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTCATTAAGC--
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

LMX1A/MA0702.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTCATTAAGC
TTAATTAA--
 A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C
A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTCATTAAGC---
CGCATTAATTAATTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0173.1_Uncx/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TTCATTAAGC--
CATAATTAATTAACGCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTCATTAAGC
-YCATTAMC-
 A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C
A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTCATTAAGC---
CGAATTAATTAACAATA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C A C G T A C G T A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCATTAAGC
CTAATTAA--
 A C G T A C G T G T A C C G T A A G C T A C G T G T C A C G T A C T A G A T G C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T