p-value: | 1e-8 |
log p-value: | -2.007e+01 |
Information Content per bp: | 1.830 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 5.02% |
Number of Background Sequences with motif | 321.1 |
Percentage of Background Sequences with motif | 0.65% |
Average Position of motif in Targets | 43.3 +/- 30.7bp |
Average Position of motif in Background | 52.2 +/- 25.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA ATCAAGGTCA |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 2 |
Score: | 0.84 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAAAAGGTCA---- TCTCAAAGGTCACGAG |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 3 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAAAGGTCA ANGNAAAGGTCA |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 4 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAAAAGGTCA---- TCTCAAAGGTCACCTG |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 5 |
Score: | 0.80 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA- ---AAGGTCAC |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 6 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA---- -CAAAGGTCAAGGG |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 7 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA AAYTAGGTCA |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.78 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA --TRAGGTCA |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.77 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA- -CAAAGGTCAG |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 10 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAAAGGTCA --AGRGGTCA |
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