Information for 3-GTAAATTAMAACTAAT (Motif 4)

A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A C G T A G C T A C G T A C G T G C T A C G T A A C G T A C G T A C G T C G T A A G T C
p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 25.7bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0018.1_Dbx1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTAAATTAMAACTAAT
TAATTAATTAATAATTA-
 A C G T A C G T A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAAATTAMAACTAAT
GGAAANTGAAACTNA-
 A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTAAATTAMAACTAAT
AAAAAGTAAACAAAGAC----
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAAATTAMAACTAAT
AACAAACAACAAGAG--
 A C G T A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTAAATTAMAACTAAT---
---ATTTACGACAAATAGC
 A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTAAATTAMAACTAAT--
--ATATCAAAACAAAACA
 A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTAAATTAMAACTAAT
CAAAATCGAAACTAA-
 A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTAAATTAMAACTAAT
GGGTTTAATTAAAATTC--
 A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GTAAATTAMAACTAAT------
------CAAAACCAATTAATTT
 A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTAAATTAMAACTAAT
AAAAAGTAAACAAACAC----
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A C G T C A G T C G T A G T A C C T G A C G T A G T A C C G A T C G T A C G T A A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T A C G T