Information for 6-ACTGACTGGCCACAGA (Motif 16)

G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
Reverse Opposite:
A C G T G T A C A C G T A T C G C G A T A C T G C T A G A G T C G T A C C G T A C T A G A C G T A G T C G C T A A T C G C A G T
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.693
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.6 +/- 27.1bp
Average Position of motif in Background41.0 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA-
------AAACCACAGAN
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACTGACTGGCCACAGA-
-----NWAACCACADNN
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA
--TGATTGGCTANN--
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA
-CCGATTGGCT-----
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA
------AAACCACAGC
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTGACTGGCCACAGA
-----NAAACCACAG-
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTGACTGGCCACAGA
--WDNCTGGGCA----
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA
--NNACTTGCCTT---
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACTGACTGGCCACAGA
-----CTGCCCGCA--
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:ACTGACTGGCCACAGA---
-----NTGCCCANNGGTNA
 G C T A A T G C C A G T T A C G G T C A A G T C G C A T A C T G T A C G A G T C A G T C C G T A A T G C T C G A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A