Information for 6-GGYCACAGVATGV (Motif 12)

A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
Reverse Opposite:
A T G C T A G C C G T A A C G T A G T C A G T C C G A T A C T G A C G T A T C G C T A G A G T C A G T C
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.705
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif139.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets41.4 +/- 23.0bp
Average Position of motif in Background48.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGYCACAGVATGV--
GAGCACAGCAGGACA
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGYCACAGVATGV--
AATCGCACTGCATTCCG
 A C G T A C G T A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGYCACAGVATGV
GGAACAAAGR----
 A C G T A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGYCACAGVATGV
---AACAGGAAGT
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGYCACAGVATGV
---CACAGN----
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGYCACAGVATGV--
CCACACAGCAGGAGA
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGYCACAGVATGV--
CCACACAGCAGGAGA
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGYCACAGVATGV
AAGGTCAC-------
 A C G T A C G T A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGYCACAGVATGV
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGYCACAGVATGV--
---CACAGCAGGGGG
 A C T G C T A G A G T C A T G C C G T A T G A C C G T A A C T G T C A G C G T A C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G