Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-55 | -1.269e+02 | 0.0000 | 60.0 | 7.33% | 82.1 | 0.37% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-46 | -1.074e+02 | 0.0000 | 64.0 | 7.82% | 139.5 | 0.63% | motif file (matrix) |
svg |
3 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.455e+01 | 0.0000 | 36.0 | 4.40% | 179.6 | 0.81% | motif file (matrix) |
svg |
4 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-14 | -3.225e+01 | 0.0000 | 42.0 | 5.13% | 263.7 | 1.20% | motif file (matrix) |
svg |
5 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-12 | -2.779e+01 | 0.0000 | 48.0 | 5.87% | 384.8 | 1.74% | motif file (matrix) |
svg |
6 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-12 | -2.777e+01 | 0.0000 | 59.0 | 7.21% | 547.5 | 2.48% | motif file (matrix) |
svg |
7 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.756e+01 | 0.0000 | 53.0 | 6.48% | 459.7 | 2.08% | motif file (matrix) |
svg |
8 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-10 | -2.507e+01 | 0.0000 | 52.0 | 6.36% | 477.0 | 2.16% | motif file (matrix) |
svg |
9 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-9 | -2.235e+01 | 0.0000 | 55.0 | 6.72% | 563.1 | 2.55% | motif file (matrix) |
svg |
10 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-9 | -2.116e+01 | 0.0000 | 27.0 | 3.30% | 171.0 | 0.77% | motif file (matrix) |
svg |
11 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.916e+01 | 0.0000 | 57.0 | 6.97% | 653.0 | 2.96% | motif file (matrix) |
svg |
12 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.534e+01 | 0.0000 | 52.0 | 6.36% | 640.4 | 2.90% | motif file (matrix) |
svg |
13 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.385e+01 | 0.0000 | 38.0 | 4.65% | 423.0 | 1.92% | motif file (matrix) |
svg |
14 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.270e+01 | 0.0001 | 29.0 | 3.55% | 293.7 | 1.33% | motif file (matrix) |
svg |
15 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.244e+01 | 0.0001 | 28.0 | 3.42% | 281.6 | 1.28% | motif file (matrix) |
svg |
16 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-5 | -1.237e+01 | 0.0001 | 19.0 | 2.32% | 147.5 | 0.67% | motif file (matrix) |
svg |
17 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.221e+01 | 0.0001 | 63.0 | 7.70% | 930.6 | 4.22% | motif file (matrix) |
svg |
18 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-4 | -1.143e+01 | 0.0002 | 37.0 | 4.52% | 453.9 | 2.06% | motif file (matrix) |
svg |
19 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -1.115e+01 | 0.0003 | 42.0 | 5.13% | 551.2 | 2.50% | motif file (matrix) |
svg |
20 |
| HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer | 1e-4 | -1.097e+01 | 0.0003 | 12.0 | 1.47% | 70.2 | 0.32% | motif file (matrix) |
svg |
21 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-4 | -1.035e+01 | 0.0006 | 13.0 | 1.59% | 87.6 | 0.40% | motif file (matrix) |
svg |
22 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-4 | -9.692e+00 | 0.0010 | 17.0 | 2.08% | 149.4 | 0.68% | motif file (matrix) |
svg |
23 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-3 | -9.184e+00 | 0.0016 | 62.0 | 7.58% | 1011.1 | 4.58% | motif file (matrix) |
svg |
24 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.000e+00 | 0.0051 | 24.0 | 2.93% | 292.6 | 1.33% | motif file (matrix) |
svg |
25 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.999e+00 | 0.0051 | 8.0 | 0.98% | 45.8 | 0.21% | motif file (matrix) |
svg |
26 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.858e+00 | 0.0054 | 92.0 | 11.25% | 1733.1 | 7.86% | motif file (matrix) |
svg |
27 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.842e+00 | 0.0054 | 20.0 | 2.44% | 225.7 | 1.02% | motif file (matrix) |
svg |
28 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -7.700e+00 | 0.0059 | 53.0 | 6.48% | 877.8 | 3.98% | motif file (matrix) |
svg |
29 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -7.027e+00 | 0.0111 | 19.0 | 2.32% | 223.0 | 1.01% | motif file (matrix) |
svg |
30 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.873e+00 | 0.0126 | 182.0 | 22.25% | 3960.3 | 17.95% | motif file (matrix) |
svg |
31 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.756e+00 | 0.0137 | 35.0 | 4.28% | 536.2 | 2.43% | motif file (matrix) |
svg |
32 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.392e+00 | 0.0190 | 10.0 | 1.22% | 86.1 | 0.39% | motif file (matrix) |
svg |
33 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.342e+00 | 0.0194 | 19.0 | 2.32% | 237.3 | 1.08% | motif file (matrix) |
svg |
34 |
| bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -6.315e+00 | 0.0194 | 23.0 | 2.81% | 312.9 | 1.42% | motif file (matrix) |
svg |
35 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.268e+00 | 0.0197 | 6.0 | 0.73% | 34.1 | 0.15% | motif file (matrix) |
svg |
36 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -6.246e+00 | 0.0197 | 45.0 | 5.50% | 764.3 | 3.46% | motif file (matrix) |
svg |
37 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.985e+00 | 0.0248 | 13.0 | 1.59% | 139.4 | 0.63% | motif file (matrix) |
svg |
38 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.958e+00 | 0.0248 | 22.0 | 2.69% | 302.8 | 1.37% | motif file (matrix) |
svg |
39 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.914e+00 | 0.0252 | 62.0 | 7.58% | 1155.9 | 5.24% | motif file (matrix) |
svg |
40 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.894e+00 | 0.0252 | 134.0 | 16.38% | 2860.4 | 12.97% | motif file (matrix) |
svg |
41 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.661e+00 | 0.0309 | 3.0 | 0.37% | 8.0 | 0.04% | motif file (matrix) |
svg |
42 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.544e+00 | 0.0339 | 37.0 | 4.52% | 621.8 | 2.82% | motif file (matrix) |
svg |
43 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.481e+00 | 0.0353 | 66.0 | 8.07% | 1270.0 | 5.76% | motif file (matrix) |
svg |
44 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -5.449e+00 | 0.0356 | 31.0 | 3.79% | 498.3 | 2.26% | motif file (matrix) |
svg |
45 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.380e+00 | 0.0373 | 41.0 | 5.01% | 714.2 | 3.24% | motif file (matrix) |
svg |
46 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -4.937e+00 | 0.0568 | 48.0 | 5.87% | 890.1 | 4.03% | motif file (matrix) |
svg |
47 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-2 | -4.924e+00 | 0.0568 | 9.0 | 1.10% | 90.9 | 0.41% | motif file (matrix) |
svg |
48 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -4.845e+00 | 0.0597 | 34.0 | 4.16% | 585.8 | 2.66% | motif file (matrix) |
svg |
49 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -4.844e+00 | 0.0597 | 24.0 | 2.93% | 374.3 | 1.70% | motif file (matrix) |
svg |
50 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -4.719e+00 | 0.0649 | 40.0 | 4.89% | 722.1 | 3.27% | motif file (matrix) |
svg |
51 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -4.717e+00 | 0.0649 | 8.0 | 0.98% | 77.9 | 0.35% | motif file (matrix) |
svg |
52 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.670e+00 | 0.0656 | 5.0 | 0.61% | 34.8 | 0.16% | motif file (matrix) |
svg |
53 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.650e+00 | 0.0657 | 20.0 | 2.44% | 299.4 | 1.36% | motif file (matrix) |
svg |
54 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -4.628e+00 | 0.0659 | 6.0 | 0.73% | 48.9 | 0.22% | motif file (matrix) |
svg |