Information for 9-TTATMCAGKTSAY (Motif 9)

A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
Reverse Opposite:
C T A G A C G T A T G C C T G A G T A C A G T C A G C T A C T G A C T G C G T A A C G T C G T A C G T A
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 28.3bp
Average Position of motif in Background63.7 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTATMCAGKTSAY
--ATCAAGGTCA-
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTATMCAGKTSAY
---NNCAGGTGNN
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTATMCAGKTSAY-
----VCAGGTRDRY
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTATMCAGKTSAY
---AACAGGTGNT
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTATMCAGKTSAY
NNTAATCCNGNCNN-
 A C G T A C G T A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTATMCAGKTSAY
TTTTCCA------
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTATMCAGKTSAY
--AAYTAGGTCA-
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTATMCAGKTSAY-
---TCAAGGTCATA
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTATMCAGKTSAY
TATAAGTAGGTCAA
 A C G T A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTATMCAGKTSAY
---TCAAGGTCAN
 A C G T C G A T C G T A A C G T G T A C A G T C C T G A A C T G A C T G G A C T A T C G C G T A A G T C
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C