Information for 5-CTCCCCTCAGCAT (Motif 4)

A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T C T A G A G T C C G A T A C T G C G T A A C T G A C T G C T A G A C T G C G T A A C T G
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.2 +/- 18.4bp
Average Position of motif in Background79.9 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTCAGCAT
-TCCCCA------
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCCCCTCAGCAT---
----NGTCAGCANTTT
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCCCCTCAGCAT---
-----GTCAGCANNTN
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCCTCAGCAT
ATCCCCGCCCCTAAAA--
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCCTCAGCAT
TTCCCCCTAC----
 A C G T A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCCCTCAGCAT----
--HWWGTCAGCAWWTTT
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCCCTCAGCAT----
--CCACACAGCAGGAGA
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCCCCTCAGCAT----
--CCACACAGCAGGAGA
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCCCCTCAGCAT-
----DCTCAGCAGG
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCCCCTCAGCAT---
-CTGAGTCAGCAATTT
 A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G C T A C G T A C G T A C G T
A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T