Information for 18-CMCKCCSGGGDGT (Motif 29)

A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T
Reverse Opposite:
G C T A T A G C G C A T A T G C A T G C G T A C A T C G A C T G A T C G G T A C T C A G A C G T T A C G
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.702
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif148.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets55.1 +/- 19.1bp
Average Position of motif in Background43.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CMCKCCSGGGDGT-
NCCCCCCCGGGGGGN
 A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CMCKCCSGGGDGT-
CCCCCCCGGGGGNN
 A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CMCKCCSGGGDGT-
ACCCCCCCGGGGGGN
 A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CMCKCCSGGGDGT-
CACAGCGGGGGGTC
 A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CMCKCCSGGGDGT-
NCGCAGCGGGGGGTC
 A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CMCKCCSGGGDGT-
NCNCAGCGGGGGGTC
 A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CMCKCCSGGGDGT---
-NNNACCGAGAGTNNN
 A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CMCKCCSGGGDGT
ACATGCCCGGGCAT
 A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CMCKCCSGGGDGT-
CTTCGCGGGGGGTC
 A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CMCKCCSGGGDGT
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C A C T G A T G C A G T C T A G C A C T G T A C G T A C G C G T A A T C G C A G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T