Information for 12-NCCTGACAGG (Motif 28)

C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
Reverse Opposite:
G A T C G A T C G C A T C T A G G C A T G A T C T C G A A T C G A C T G G C A T
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.612
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif724.9
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets47.1 +/- 26.4bp
Average Position of motif in Background49.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:NCCTGACAGG-
-VBTGWCAGCB
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:NCCTGACAGG
--TTGACAGC
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--NCCTGACAGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:NCCTGACAGG
--CTGTCTGG
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-NCCTGACAGG-----
NNATTGACAGGTGCTT
 A C G T C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:NCCTGACAGG
-RHTGWCAR-
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:NCCTGACAGG
--TTGACAGG
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NCCTGACAGG
--TTGACAG-
 C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-NCCTGACAGG-----
GTATTGACAGGTNNTT
 A C G T C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-NCCTGACAGG-----
GGATTGACAGGTCNTT
 A C G T C G T A T G A C T A G C A G C T C T A G C G T A G A T C C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T