Information for 8-SCARCTGTSTDCAGAT (Motif 20)

A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
Reverse Opposite:
G T C A A G C T T A G C G C A T C T A G G A T C C T G A A T C G T G C A T A G C C T G A A T C G A G C T A C G T A T C G T A C G
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.580
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 26.0bp
Average Position of motif in Background46.9 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:SCARCTGTSTDCAGAT----
---NSTGTTTRCWCAGBNNN
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SCARCTGTSTDCAGAT
-CCATTGTATGCAAAT
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--SCARCTGTSTDCAGAT
NNGCAGCTGTT-------
 A C G T A C G T A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--SCARCTGTSTDCAGAT
NNGCAGCTGTC-------
 A C G T A C G T A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:SCARCTGTSTDCAGAT
GCAGCTGTNN------
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCARCTGTSTDCAGAT
-CAGCTGTT-------
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SCARCTGTSTDCAGAT
CCAGCTGTTN------
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:SCARCTGTSTDCAGAT
--VBSYGTCTGG----
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-SCARCTGTSTDCAGAT
TGCAGCTGTCCCT----
 A C G T A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:SCARCTGTSTDCAGAT---
--NNGTATGTGCACATNNN
 A T G C T A G C T G C A C T G A T A G C G A C T A T C G A C G T T A G C A G C T C T A G A G T C C G T A A T C G T C G A C A G T A C G T A C G T A C G T
A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G