Information for 4-AGCAGACGGACCC (Motif 9)

G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
Reverse Opposite:
A T C G A T C G T A C G C G A T G T A C A G T C A T C G C G A T G T A C A G C T A T C G A G T C A C G T
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.788
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif70.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets42.3 +/- 26.8bp
Average Position of motif in Background45.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCAGACGGACCC
-CCAGACRSVB--
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCAGACGGACCC
-CCAGACAG----
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCAGACGGACCC
AACAGATGGT---
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCAGACGGACCC
AACAGATGGC---
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAGACGGACCC
AGCAACAGCCGCACC-
 A C G T A C G T A C G T G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCAGACGGACCC
AACAKATGGY---
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGCAGACGGACCC
------CGGAGC-
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCAGACGGACCC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCAGACGGACCC
AACAGATGGTCN-
 G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGACGGACCC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T G T C A T A C G A T G C C T G A A C T G C G T A A T G C A C T G C A T G C G T A A T G C A T G C A T G C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G