Information for 10-AACAATCCAC (Motif 20)

C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G T A C G C T G A C G A T A C G T A C T G A C G T A C G T
p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 30.5bp
Average Position of motif in Background45.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AACAATCCAC
NAACAAT----
 A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AACAATCCAC
AACAAT----
 C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AACAATCCAC-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACAATCCAC
GTAAACAAT----
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AACAATCCAC---
-SSAATCCACANN
 C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AACAATCCAC--
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AACAATCCAC
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AACAATCCAC--
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AACAATCCAC
RNAACAATGG--
 A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AACAATCCAC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G C T A G T C A G T C C G T A A T G C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G