Information for 5-TGAGACCCTGCGCCCA (Motif 11)

A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A C T G A G T C C T A G A G T C C G T A C T A G T A C G A T C G C G A T A G T C A C G T A G T C G T C A
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 29.0bp
Average Position of motif in Background45.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACCCTGCGCCCA
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGAGACCCTGCGCCCA----
---AAGCATACGCCCAACTT
 A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGAGACCCTGCGCCCA
TTGAGTGSTT-------
 A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGAGACCCTGCGCCCA-----
-----GGGTGTGCCCAAAAGG
 A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TGAGACCCTGCGCCCA--
------GCTCCGCCCMCY
 A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGAGACCCTGCGCCCA
TTAAGTGCTT-------
 A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TGAGACCCTGCGCCCA
---GCGCCTGCGCA--
 A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TGAGACCCTGCGCCCA
ATAAATGACACCTATCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCCTGCGCCCA
AATNTTGATACCCTATN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCCTGCGCCCA
ANANNTGATACCCTATN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A T G C A T G C A G T C A C G T C T A G A G T C C T A G A G T C A G T C A G T C C G T A
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T A C G T A C G T A C G T