Information for 2-AGACYTTGAADTTGGA (Motif 3)

C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A C T G A G A C T A C G T C A G T A G T C G T C A C G T A C T G A A T C G A C G T A G T C A G C T
p-value:1e-15
log p-value:-3.465e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 19.0bp
Average Position of motif in Background42.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGACYTTGAADTTGGA
GCTGACCTTGAACTN---
 A C G T A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGACYTTGAADTTGGA
ATGACCTTGAA------
 A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AGACYTTGAADTTGGA
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGACYTTGAADTTGGA
NATGACCTTGA-------
 A C G T A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGACYTTGAADTTGGA
TGACCTTGAN------
 C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGACYTTGAADTTGGA
--CCTTTGATGT----
 C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGACYTTGAADTTGGA
ATGACCTTGA-------
 A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGACYTTGAADTTGGA
TGACCTTGAV------
 C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGACYTTGAADTTGGA
TGGACTTTGNNCTNTG-
 A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGACYTTGAADTTGGA
NTGACCTTGA-------
 A C G T C T G A C T A G C G T A A T G C A G C T A C G T A C G T C T A G G T C A C G T A C G T A A G C T A C G T C T A G A C T G C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T