Information for 8-CATGTGTGGCWTGTSA (Motif 17)

G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
Reverse Opposite:
G C A T T A G C C G T A T A G C G C T A C G T A C T A G T A G C G T A C C G T A A G T C C G T A A G T C C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.3 +/- 24.6bp
Average Position of motif in Background33.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATGTGTGGCWTGTSA
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTGGCWTGTSA
ACCATATGTT--------
 A C G T A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CATGTGTGGCWTGTSA
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATGTGTGGCWTGTSA
CCATGTGCTT-------
 A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATGTGTGGCWTGTSA
CAGGTGAGG-------
 G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATGTGTGGCWTGTSA
CCATATGT---------
 A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTGGCWTGTSA
AACACGTGTT--------
 A C G T A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATGTGTGGCWTGTSA
---CTGTTCCTGG---
 G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGTGGCWTGTSA-
ACATCTGGWWTYAATTAR
 A C G T G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATGTGTGGCWTGTSA
CTTGAGTGGCT-----
 G T A C G T C A A C G T A C T G A C G T A C T G A C G T A C T G A T C G A G T C C G A T C A G T A C T G A C G T A T C G C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T