Information for 5-TAGTTGGCGG (Motif 4)

G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G
Reverse Opposite:
A T G C A T G C A C T G T G A C T A G C T G C A G C T A A G T C G A C T C G T A
p-value:1e-12
log p-value:-2.973e+01
Information Content per bp:1.682
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.35%
Number of Background Sequences with motif905.5
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets52.9 +/- 25.9bp
Average Position of motif in Background50.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAGTTGGCGG-
CAAGATGGCGGC
 A C G T G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTGGCGG------
NAGANTGGCGGGGNGNA
 A C G T G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGTTGGCGG---
-RGKGGGCGGAGC
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGTTGGCGG-
CAAGATGGCGGC
 A C G T G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAGTTGGCGG----
--BTKGGCGGGAAA
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAGTTGGCGG
---TTGGCA-
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGTTGGCGG----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TAGTTGGCGG--
-TAATGGCGGNC
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAGTTGGCGG-
--NTTGGCANN
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAGTTGGCGG---
-RGKGGGCGKGGC
 G C A T C T G A C T A G C G A T A C G T A T C G A C T G T G A C T A C G A T C G A C G T A C G T A C G T
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C