Information for 8-CTGCACTCVVTGATCA (Motif 19)

A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
Reverse Opposite:
C G A T C T A G C G T A A G C T A G T C C G T A A G C T A C T G A C T G C G T A C A T G A G C T A C T G A T G C C G T A A T C G
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.770
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 21.4bp
Average Position of motif in Background79.3 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCVVTGATCA-
-TGAACTCNATGAACTC
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A A C G T
A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGCACTCVVTGATCA--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PH0016.1_Cux1_1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGCACTCVVTGATCA-----
----ACCGGTTGATCACCTGA
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGCACTCVVTGATCA
MRSCACTYAA------
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCVVTGATCA
-TGAACCCGATGACCC
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGCACTCVVTGATCA
AASCACTCAA------
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCVVTGATCA
-NSCACTYVAV-----
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGCACTCVVTGATCA
--CAAATCACTG----
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCACTCVVTGATCA
AGCCACTCAAG-----
 A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGCACTCVVTGATCA
AGATGCAATCCC------
 A C G T A C G T A T G C C G A T A T C G G T A C C T G A G T A C A C G T A G T C T A G C T C G A G A C T A C T G C T G A C G A T G A T C C G T A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T