Information for 7-AGCGGGGGACAGA (Motif 15)

C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
Reverse Opposite:
A C G T A T G C A C G T A C T G C G A T A G T C A T G C A G T C A G T C A G T C C T A G A G T C A C G T
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.8 +/- 14.7bp
Average Position of motif in Background68.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGGGACAGA
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCGGGGGACAGA
---TGGGGA----
 C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGGACAGA
DCHCAGCAGGRGGCC--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGGGGACAGA-
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGGACAGA
NCNCAGCGGGGGGTC--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCGGGGGACAGA--
---AGGTGHCAGACA
 C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCGGGGGACAGA---
---AGGTGNCAGACAG
 C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGGGGACAGA
CACAGCGGGGGGTC--
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGGACAGA
NCGCAGCGGGGGGTC--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCGGGGGACAGA
-GGGCGGGACC--
 C G T A A C T G A G T C A C T G A C T G A C T G A T C G A C T G C G T A A G T C C G T A A T C G C G T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T