Information for 6-CCTGTRSWCMTGG (Motif 6)

A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G C G T A A T C G A G C T C G T A A G T C C G T A C T A G A C T G
p-value:1e-12
log p-value:-2.835e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 29.3bp
Average Position of motif in Background35.2 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGTRSWCMTGG
GCTGTG-------
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTGTRSWCMTGG------
GNCTGTASTRNTGBCTCHTT
 A C G T A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGTRSWCMTGG---
--NGTTGCCATGGCAA
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTGTRSWCMTGG
---AAGCACATGG
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGTRSWCMTGG---
--GGTTGCCATGGCAA
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTGTRSWCMTGG----
-CGGTTGCCATGGCAAC
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTRSWCMTGG
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTGTRSWCMTGG-----
--CGTTGCCATGGCAACN
 A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTGTRSWCMTGG
SCHTGTTTACAT--
 A C G T A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTGTRSWCMTGG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T C T G A A T G C C G A T G T A C G T C A A C G T A C T G A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T