Information for 4-CTTTTAAATTAAAAGT (Motif 4)

A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C G T A G C T C G A T C T G A G C T A G C A T C G A T A G C T G T C A C G T A G T C A C G T A A C T G
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.766
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 27.4bp
Average Position of motif in Background54.7 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTAAATTAAAAGT
CCTTTGATGT-------
 A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTAAATTAAAAGT
TNCCTTTGATCTTN-----
 A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTTAAATTAAAAGT
-ATTTGAATT------
 A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTAAATTAAAAGT
CCTTTGAWGT-------
 A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTTTAAATTAAAAGT
CATTGTTATGCAAAT-
 A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTAAATTAAAAGT
NNTTCCTTTGATCTANA----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTAAATTAAAAGT
NNTTCCTTTGATCTNNA----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTAAATTAAAAGT
TNCCTTTGATGT-------
 A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTTTTAAATTAAAAGT
CTTTGTTATGCAAAT-
 A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTAAATTAAAAGT
CCTTTGATCTTT-----
 A C G T A G T C C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G A T A G C T G C T A T C G A C G T A C G T A C T A G A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T