Information for 9-TTYTKCATTATWK (Motif 13)

C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
Reverse Opposite:
G T C A G C A T C G T A C A G T G T C A G T C A C G A T A T C G G T C A G C T A T C G A G T C A G C T A
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.619
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif485.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets40.9 +/- 20.7bp
Average Position of motif in Background51.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTYTKCATTATWK--
NNCATTCATTCATNNN
 A C G T C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTYTKCATTATWK
BTVATTWGCATA----
 A C G T A C G T A C G T C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTYTKCATTATWK
----YCATTAMC-
 C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTYTKCATTATWK
TTCATTTGCATAT---
 A C G T A C G T A C G T C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTYTKCATTATWK---
GACNTCATTAATAANN
 C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTYTKCATTATWK
ATTTGCATAA---
 C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTYTKCATTATWK--
NANTTCATTGAATTA
 C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTYTKCATTATWK---
NAATTAATTAATTNNN
 C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T A C G T A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTYTKCATTATWK--
NNTTTTTAATTAATTCG
 A C G T A C G T C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTYTKCATTATWK
AATTTGCATANT--
 A C G T C A G T A C G T A G C T C G A T C A G T A T G C C G T A A C G T A C G T G T C A C G A T C G T A C A G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T