Information for 9-CAGYYTCAAGCAT (Motif 17)

A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
Reverse Opposite:
G C T A A G C T T A C G A T G C A C G T A C G T T A C G C T G A T C G A C T G A A G T C A C G T T A C G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.709
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif67.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets62.7 +/- 22.2bp
Average Position of motif in Background48.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
------CAAGCTT
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
-AGCCTCAGGCA-
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
-CGCCTCAGGCA-
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGYYTCAAGCAT---
GAAGATCAATCACTTA
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
-AGCCTCAGGCA-
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
CGGTTTCAAA---
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGYYTCAAGCAT-
--GGCTCYAKCAYC
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGYYTCAAGCAT---
GAAGATCAATCACTAA
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
-----CCAATCAA
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CAGYYTCAAGCAT
-------CAGCC-
 A T G C C G T A A C T G G A C T A G C T A G C T A G T C G T C A C G T A A T C G A T G C C T G A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T