Information for 14-GTGKCCTATT (Motif 42)

A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A C T G A C T G G T C A G T A C C G T A A G T C
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.905
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.4 +/- 19.5bp
Average Position of motif in Background50.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGKCCTATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGKCCTATT
GTGACCTT--
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTGKCCTATT-----
-----CTATTTTTGG
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGKCCTATT--
CAGTTTCGNTTCTN
 A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGKCCTATT---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGKCCTATT-
-TGACCTARTT
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGKCCTATT---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGKCCTATT
-TGACCTYA-
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGKCCTATT---
-TGACCTTTNCNT
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGKCCTATT----
TTGACCTANTTATN
 A C T G A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A