Information for 13-CGACCTCACC (Motif 38)

A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C
Reverse Opposite:
A C T G C A T G G A C T A C T G C T G A A C T G A C T G G A C T A G T C A T C G
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.843
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif58.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets60.0 +/- 26.4bp
Average Position of motif in Background48.1 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGACCTCACC-
GCGACCACACTG
 A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGACCTCACC-
ATGACGTCATCN
 A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGACCTCACC
TGACCTYA--
 A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGACCTCACC-----
TCGACCCCGCCCCTAT
 A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGACCTCACC
TGACGTCA--
 A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGACCTCACC-
ATGACGTCATCN
 A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGACCTCACC---
NATGACATCATCNNN
 A C G T A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGACCTCACC-----
NRGCCCCRCCCHBNN
 A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGACCTCACC-
RTGACGTCAYCN
 A C G T A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGACCTCACC--
-GGCCACACCCA
 A T G C T C A G C T G A A G T C G T A C A G C T A G T C C T G A G A T C A G T C A C G T A C G T
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A