Information for 15-ATTTAAGAGCTTTAGT (Motif 36)

G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
Reverse Opposite:
T G C A A G T C C G A T C G T A C G T A T C G A A T C G G T A C G C A T G T A C A C G T A C G T G T C A G T C A G T C A C A G T
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 17.1bp
Average Position of motif in Background75.0 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTAAGAGCTTTAGT
CNTTAAGTACTTAANG
 G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAGAGCTTTAGT
NATTTAAGTACTTNAAA
 A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAGAGCTTTAGT
NTNNTTAAGTGGTTANN-
 A C G T A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTTAAGAGCTTTAGT
--TTAAGTGCTT----
 G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAGAGCTTTAGT
NATTTAAGTACTTANNA
 A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAGAGCTTTAGT
NTNNTTAAGTGGNTNAN-
 A C G T A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATTTAAGAGCTTTAGT
--TTGAGTGSTT----
 G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAAGAGCTTTAGT
NAATTTTACGAGNTNN---
 A C G T A C G T A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAGAGCTTTAGT
AATTTCAAGTGGCTTN--
 A C G T A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAGAGCTTTAGT
AATNTTAAGTGGNTNN--
 A C G T A C G T G C T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G T A G C A C G T A C G T C G A T C G T A T A C G A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T