Information for 12-TAATGGCAGT (Motif 33)

A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T C G T A
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 15.4bp
Average Position of motif in Background83.6 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TAATGGCAGT-
TAATGGCGGNC
 A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TAATGGCAGT---
---TGGCAGTTGN
 A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCAGT
NTAATTGN---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATGGCAGT
CTAATKGV---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGCAGT
GTTAATGGCC--
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATGGCAGT
GKTAATGR----
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAATGGCAGT
TNNGGGCAG-
 A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAATGGCAGT------
NNNTGGCAGTTGGTNN
 A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCAGT
NTAATTGG---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TAATGGCAGT---
---TGGCAGTTGG
 A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G