Information for 6-AAGCTCATTA (Motif 18)

C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A
Reverse Opposite:
C G A T C G T A C T G A C A G T A C T G C T G A A C T G G T A C A G C T G C A T
p-value:1e-9
log p-value:-2.250e+01
Information Content per bp:1.735
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif392.4
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets51.8 +/- 28.9bp
Average Position of motif in Background47.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:AAGCTCATTA-
-AGCTCATTAT
 C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTCATTA-----
NNNACCTCATTATCNTN
 A C G T A C G T C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTCATTA-----
GCAACCTCATTATNNNN
 A C G T A C G T C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AAGCTCATTA--
----YCATTAMC
 C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAGCTCATTA-----
GGAGGTCATTAATTAT
 A C G T C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAGCTCATTA--
--GGTAATTAGC
 C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAGCTCATTA--
--GGTAATTAGC
 C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T
A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

EMX1/MA0612.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAGCTCATTA--
--NNTAATTAGN
 C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A A C G T A C G T
A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGCTCATTA
TCAAGGTCAT--
 A C G T A C G T C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGCTCATTA
TCAAGGTCATA-
 A C G T A C G T C G T A C T G A C A T G T G A C G A C T A G T C G T C A A G C T C G A T C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T