Information for 5-GGCGTCCCTGGCA (Motif 7)

A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T C T A G A G T C A G T C C G T A A C T G A C T G A C T G C G T A G T A C A T C G A G T C A G T C
p-value:1e-13
log p-value:-3.113e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 20.3bp
Average Position of motif in Background54.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCGTCCCTGGCA
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GGCGTCCCTGGCA-
------CTTGGCAA
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCGTCCCTGGCA----
-CAATCACTGGCAGAAT
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGCGTCCCTGGCA--
------NTTGGCANN
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGCGTCCCTGGCA
-------TTGGCA
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCGTCCCTGGCA--
-GTTGCCATGGCAAC
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T A C G T
A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCGTCCCTGGCA-
NGTTGCCATGGCAA
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCGTCCCTGGCA-----
---TTTCCTGGAAAGNNN
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCGTCCCTGGCA-
GGTTGCCATGGCAA
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCGTCCCTGGCA------
----TCCCAGMCRAGCCCC
 A C T G C T A G A T G C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C