Information for 2-GTCAGGATTTCAR (Motif 5)

A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A C G T A A C G T A T G C A G T C A C G T A C T G G T C A A T G C
p-value:1e-14
log p-value:-3.233e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 23.8bp
Average Position of motif in Background43.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mafb/MA0117.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGGATTTCAR
NGTCAGCANTTT--
 A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGGATTTCAR
AAGTCAGCANTTTTN
 A C G T A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCAGGATTTCAR
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCAGGATTTCAR
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGGATTTCAR
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCAGGATTTCAR
-NCTGGAATGC--
 A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCAGGATTTCAR
GTCAGCANNTN--
 A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCAGGATTTCAR
NACAGGAAAT---
 A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTCAGGATTTCAR
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCAGGATTTCAR
ANCAGGATGT---
 A T C G C A G T A G T C C G T A A C T G A T C G C G T A C G A T A C G T A C G T A G T C C G T A C T A G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T