Information for 8-GGGACAGATCCCAACC (Motif 26)

C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
Reverse Opposite:
A C T G C T A G A C G T C G A T A C T G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.879e+00
Information Content per bp:1.918
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGGACAGATCCCAACC----
----ACTATGCCAACCTACC
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGGACAGATCCCAACC
-------ATGCCAACC
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGGACAGATCCCAACC
CCAGGAACAG---------
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGGACAGATCCCAACC
-TGACAGCTGTCA---
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGGACAGATCCCAACC--
---NNAGATNVNWATCTN
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

TP63/MA0525.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGGACAGATCCCAACC----
--GACATGTCCCAACATGTT
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C T G A A G T C C T G A G C A T A C T G G A C T G A T C T G A C A G T C C T G A C T G A A G T C C G T A G A C T A C T G G A C T G A C T

PKNOX1/MA0782.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGGACAGATCCCAACC
-TGACAGGTGTCA---
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGACAGATCCCAACC
-TGACAGGTGTCA---
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGACAGATCCCAACC
-TGACAGCTGTCA---
 C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GGGACAGATCCCAACC
GGATTGACAGGTCNTT---
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G C G T A A C G T A G T C G T A C A G T C C G T A C G T A A G T C T G A C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T A C G T