Information for 25-TAGAGAGGATTTC (Motif 46)

A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T C G T A
p-value:1e-1
log p-value:-4.134e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAGAGAGGATTTC-----
-TNNNATGATTTCNNCNN
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAGAGAGGATTTC-
----GGGGATTTCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAGAGAGGATTTC
--AAGAGGATTAG
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TAGAGAGGATTTC--
---NGGGGATTTCCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TAGAGAGGATTTC-
----GGGAATTTCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TAGAGAGGATTTC-
----GGGAATTTCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGGATTTC
BTBRAGTGSN----
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGGATTTC
CTTGAGTGGCT---
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGGATTTC
TTGAGTGSTT---
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TAGAGAGGATTTC-
----GGGGATTTCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C