p-value: | 1e-8 |
log p-value: | -1.916e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.54% |
Number of Background Sequences with motif | 73.5 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 51.1 +/- 24.3bp |
Average Position of motif in Background | 48.1 +/- 22.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rarg/MA0859.1/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTCAAAAGGCTAC AAGGTCAAAAGGTCAA |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTCAAAAGGCTAC CGGTTTCAAA------- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCAAAAGGCTAC NATTCAAAT------ |
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PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTCAAAAGGCTAC--- GGCAAAAGTCCAATAA |
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Rarb/MA0857.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTCAAAAGGCTAC AAAGGTCAAAAGGTCA- |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTCAAAAGGCTAC ATGCAACAGGTGG- |
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Nr2f6(var.2)/MA0728.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTCAAAAGGCTAC GAGGTCAAAAGGTCA- |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTCAAAAGGCTAC AANTTCAAGTGGCTTN |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTCAAAAGGCTAC ACATCAAAGG----- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTCAAAAGGCTAC GNCTATAAAAGG---- |
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