Information for 17-GTCTTCABAGAGTGAG (Motif 31)

A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
Reverse Opposite:
A G T C A G C T A T G C C G T A A G T C A C G T A G T C A C G T T A C G A C G T A T C G G T C A C G T A A C T G G T C A G T A C
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 27.8bp
Average Position of motif in Background45.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GTCTTCABAGAGTGAG-
-------TTRAGTGSYK
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTCTTCABAGAGTGAG
-GCTTCC---------
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GTCTTCABAGAGTGAG-----
-----TGCGGAGTGGGACTGG
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:GTCTTCABAGAGTGAG--
--------TGAGTCAGCA
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:GTCTTCABAGAGTGAG-
-------TTGAGTGSTT
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GTCTTCABAGAGTGAG
CGTCTAGACA-------
 A C G T A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.45
Offset:8
Orientation:forward strand
Alignment:GTCTTCABAGAGTGAG---
--------CAGGTAAGTAT
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.45
Offset:0
Orientation:forward strand
Alignment:GTCTTCABAGAGTGAG
GAGTTCATTGAGTTCA
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:GTCTTCABAGAGTGAG
ATTTGCATACAATGG-
 A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.45
Offset:-4
Orientation:forward strand
Alignment:----GTCTTCABAGAGTGAG
VBSYGTCTGG----------
 A C G T A C G T A C G T A C G T A C T G C A G T A G T C A C G T A C G T A T G C C G T A A G T C G T C A C T A G C G T A A C T G A C G T A T C G C T G A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T