Information for 9-GCGAACHAGA (Motif 25)

A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A
Reverse Opposite:
A C G T A T G C G A C T C G T A T C A G A G C T A G C T T A G C A T C G A G T C
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.726
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif147.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets45.5 +/- 23.9bp
Average Position of motif in Background49.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCGAACHAGA-----
GNNACCGAGAATNNN
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGAACHAGA-----
TTGACCGAGAATTCC
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCGAACHAGA-----
NNNACCGAGAGTNNN
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGAACHAGA----
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCGAACHAGA-------
NNGATCTAGAACCTNNN
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCGAACHAGA
CGTGCCAAG----
 A C G T A C G T A C G T A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCGAACHAGA
ATGCCAACC---
 A C G T A C G T A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGAACHAGA
TGCCAA-----
 A C G T A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGAACHAGA------
-NGNTCTAGAACCNGV
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCGAACHAGA---
---ANCAGGATGT
 A C T G T A G C A T C G T C G A T C G A A G T C G C A T C T G A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T